Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888275.1_cds_XP_016442844.1_38067
CDS Infomation

[gene=LOC107768244] [db_xref=GeneID:107768244] [protein=pentatricopeptide repeat-containing protein At3g61360-like] [protein_id=XP_016442844.1] [location=complement(join(51933..51945,52141..53684))] [gbkey=CDS]
Sequence

ATGGTGGTCGTGCTTTCTAAACGAATAAATAAATTAGGTCAAGTTTTTCGAGTTGTTGGA
CAGCTAAAGGATCACTTTTGGTCAAGTAGTTGGCTACATTCAGTTTCAGAAACAAAAGAT
GACATTGAAACAATTGCTAGAATCATCAATGACCACCCTTTTCCTGTTCAGCCATTGCAA
CCAACACTTAAACTTCATATCTCTCCGAGTGTTTTGTCTGCCAAGTTTGTTGAAAATGTC
CTAGGTCGCCTATTTGCAGCACATGCAAATGGACTTAAAGCATATGAATTTTTTGAGTTC
TGCCTCCGCCATTCTGAATACAGTCCAACCTCAGATGCATTTGAGAAGACACTTCACATA
CTAGCAAGAATGCGTTATTTTGATAAAGTTTGGGAACTAATGAAGAAAATTCAACAGCTA
CACCCGTCCTTGCTCACTCTTAAGTCATTGAGCATCGTGCTATCAAGAATAGCAAAACAT
CAATCCTATGAAGATGCCCTTGAAGCGTTTGAAAAGATGGAGAAGCATTTATTCCCTGCG
AAGAAATTTGGCACTGAAGAGTTCAATATTCTTCTTCGAGCATTTTGCACGCAGAGGCAG
ATGAAAGAAGCTCGTTCGATATTCAACAAACTCCACTCAAGGTTCCCACCTGATACAAAG
ACAATGAATATCTTGCTTTTGGGATTCAAGGAATCAGGGGATATTACTGCGGTAGAGTTA
TTTTACCATGAGATGGTTAAAAGAGGGTTTAAGCCTAATAACGTAACGCACGGTATAAGA
ATCGACGCTTACTGTAAGAAAGGTCATCTTGGTGATGCTTTGAAACTATTTGAAGAAATG
GAGAGGGTAAATTGCTTGCCCACAGTTCAGACGATAACAACTTTGATTCATGGAGCAGGA
ATTGCTCGTAATATAGCTAAAGCAAAAGAACTTTTCAATGAAATTTACAAGAGAAATTTG
CAACCAGATACTGGGGCCTATAATGCCCTTGTGAGTTCTCTTATCAAATCCAGGGATGTT
AAATCTGCAGCAGGCTTAATGGAAGAGATGGAGGAGAAAAATATTGAGCTTGACCATTTA
ACTTACCACACTATGTTCTGGGGATTGATAAGATCAAAAGATGTTGGCGGTGTCATTGAT
CTTTACGAAAAGATGATCGACAAAAATTTCTTGCCTAAGGCACGTACTGTTGTGACGCTG
ATGAAATTCTTCTGTGAGAACCGCAGACTTGATCTGGGCTTAAGTTTATGGAATTACCTG
ATGGATAAAGGGCACTGTCCACACTGCCATTCTCTGGAAATTTTGGTCACCGGATTGTGT
TCCCGTGGGAGAGTTGAAGAAGCATTTGAGTGCTCTGAGGAAATGTTGAAGAGGGGTAGG
CACATGAGTGAGCTAGTGTATCAGATGTTGAAGAGGTCTCTCTTACAGCTGGGGGAGGAG
GAAAAGTTACAGAAGCTGTACGAAATGACAAAGAGGTTAGAAATGATATTGCCTCCTTAT
GGACAAACAATTGGGCACAGCCTAGGTGCAGATCTAGAAGTAAGGAATTTTTCCTAG

Peptide Sequence

PEP ID

XP_016442844.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Nicotiana tabacum]
Sequence

MVVVLSKRINKLGQVFRVVGQLKDHFWSSSWLHSVSETKDDIETIARIINDHPFPVQPLQ
PTLKLHISPSVLSAKFVENVLGRLFAAHANGLKAYEFFEFCLRHSEYSPTSDAFEKTLHI
LARMRYFDKVWELMKKIQQLHPSLLTLKSLSIVLSRIAKHQSYEDALEAFEKMEKHLFPA
KKFGTEEFNILLRAFCTQRQMKEARSIFNKLHSRFPPDTKTMNILLLGFKESGDITAVEL
FYHEMVKRGFKPNNVTHGIRIDAYCKKGHLGDALKLFEEMERVNCLPTVQTITTLIHGAG
IARNIAKAKELFNEIYKRNLQPDTGAYNALVSSLIKSRDVKSAAGLMEEMEEKNIELDHL
TYHTMFWGLIRSKDVGGVIDLYEKMIDKNFLPKARTVVTLMKFFCENRRLDLGLSLWNYL
MDKGHCPHCHSLEILVTGLCSRGRVEEAFECSEEMLKRGRHMSELVYQMLKRSLLQLGEE
EKLQKLYEMTKRLEMILPPYGQTIGHSLGADLEVRNFS

Transcript Sequence

Gene sequence data has not been registered.